- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cb3-9 | mir-1 | cap-miR-1 | 22/22 | chrI | - | 49-70 | 7435826-7435900 | 0.998366 | Paralog | 41/61 | 3/166 |
2 | cb3-9 | mir-1 | sko-miR-1 | 20/22 | chrI | - | 49-69 | 7435826-7435900 | 0.998304 | Paralog | 41/61 | 3/166 |
3 | cb3-83 | let-7 | bfl-let-7-1-as | 22/22 | chrX | - | 49-70 | 18407638-18407712 | 0.828279 | Paralog | 44/65 | 2/337 |
4 | cb3-82 | mir-55 | cbr-miR-55 | 23/23 | chrX | - | 49-71 | 16836982-16837058 | 0.985835 | Paralog | 2/4 | 2/5 |
5 | cb3-81 | mir-788 | cbr-miR-788 | 26/26 | chrX | - | 9-34 | 16579528-16579608 | 0.91836 | Paralog | 2/3 | 2/4 |
6 | cb3-80 | mir-239 | cbr-miR-239b | 21/21 | chrX | - | 23-43 | 15174144-15174235 | 0.99981 | Paralog | 2/5 | 3/8 |
7 | cb3-8 | mir-245 | cbr-miR-245 | 22/22 | chrI | - | 49-70 | 6757247-6757326 | 0.877364 | Paralog | 2/3 | 2/4 |
8 | cb3-79 | mir-62 | cbr-miR-62 | 22/22 | chrX | - | 49-70 | 14261124-14261197 | 0.997677 | Paralog | 2/5 | 2/6 |
9 | cb3-78 | mir-784 | cbr-miR-784 | 22/22 | chrX | - | 12-33 | 13820034-13820115 | 0.998868 | Paralog | 2/3 | 2/4 |
10 | cb3-77 | mir-249 | cbr-miR-249 | 22/22 | chrX | - | 49-70 | 7892507-7892583 | 0.999901 | Paralog | 2/6 | 2/7 |
11 | cb3-76 | mir-251 | cbr-miR-251 | 24/24 | chrX | - | 14-37 | 5851575-5851660 | 0.99874 | Paralog | 2/5 | 2/6 |
12 | cb3-75 | mir-74 | cbr-miR-74 | 22/22 | chrX | - | 49-70 | 4493581-4493652 | 0.905358 | Paralog | 2/5 | 2/7 |
13 | cb3-75 | mir-74 | cel-miR-74 | 20/22 | chrX | - | 50-69 | 4493581-4493653 | 0.955253 | Paralog | 2/5 | 2/7 |
14 | cb3-73 | mir-84 | cbr-miR-84 | 22/22 | chrX | - | 8-29 | 762829-762903 | 0.920995 | Paralog | 2/3 | 2/4 |
15 | cb3-72 | mir-47 | cbr-miR-47 | 22/22 | chrX | + | 51-72 | 19620651-19620732 | 0.99461 | Paralog | 2/5 | 2/10 |
16 | cb3-71 | mir-392 | cbr-miR-392 | 22/22 | chrX | + | 51-72 | 19202549-19202634 | 0.92322 | Paralog | 2/3 | 2/4 |
17 | cb3-69 | mir-786 | cbr-miR-786 | 23/23 | chrX | + | 49-71 | 13573564-13573644 | 0.993896 | Paralog | 2/2 | 2/3 |
18 | cb3-68 | mir-240 | cbr-miR-240 | 22/22 | chrX | + | 51-72 | 13573451-13573530 | 0.991446 | Paralog | 2/2 | 2/3 |
19 | cb3-65 | mir-230 | cel-miR-230 | 21/23 | chrX | + | 51-71 | 10968466-10968545 | 0.979285 | Paralog | 2/5 | 2/6 |
20 | cb3-65 | mir-230 | cbr-miR-230 | 23/23 | chrX | + | 50-72 | 10968467-10968543 | 0.962738 | Paralog | 2/5 | 2/6 |
21 | cb3-63 | mir-785 | cbr-miR-785 | 21/21 | chrX | + | 51-71 | 7891080-7891151 | 0.997895 | Paralog | 2/5 | 2/6 |
22 | cb3-62 | mir-254 | cbr-miR-254 | 23/23 | chrX | + | 50-72 | 5320067-5320147 | 0.998807 | Paralog | 2/2 | 2/3 |
23 | cb3-61 | mir-82 | cbr-miR-82 | 22/22 | chrX | + | 51-72 | 4423750-4423826 | 0.994312 | Paralog | 2/5 | 2/7 |
24 | cb3-6 | mir-71 | cbr-miR-71 | 19/19 | chrI | - | 10-28 | 2252472-2252546 | 0.998711 | Paralog | 13/17 | 2/25 |
25 | cb3-6 | mir-71 | spu-miR-71 | 21/23 | chrI | - | 10-30 | 2252472-2252546 | 0.998074 | Paralog | 13/17 | 2/25 |
26 | cb3-59 | mir-34 | spu-miR-34 | 20/22 | chrX | + | 14-34 | 3899340-3899422 | 0.996725 | Paralog | 45/67 | 3/144 |
27 | cb3-59 | mir-34 | aga-miR-34 | 19/20 | chrX | + | 13-31 | 3899341-3899421 | 0.998134 | Paralog | 45/67 | 3/144 |
28 | cb3-59 | mir-34 | cin-miR-34 | 20/22 | chrX | + | 12-33 | 3899341-3899421 | 0.998955 | Paralog | 45/67 | 3/144 |
29 | cb3-55 | mir-253 | cbr-miR-253 | 21/21 | chrV | - | 25-45 | 9138946-9139040 | 0.997419 | Paralog | 2/6 | 2/8 |
30 | cb3-55 | mir-253 | cel-miR-253* | 19/21 | chrV | - | 25-44 | 9138946-9139040 | 0.995583 | Paralog | 2/6 | 2/8 |
31 | cb3-55 | mir-253 | cel-miR-253 | 21/21 | chrV | - | 50-70 | 9138955-9139029 | 0.984002 | Paralog | 2/6 | 2/8 |
32 | cb3-54 | lsy-6 | cbr-lsy-6 | 21/21 | chrV | - | 50-70 | 7813065-7813137 | 0.99741 | Paralog | 2/3 | 2/4 |
33 | cb3-53 | mir-61 | cbr-miR-61 | 23/23 | chrV | - | 49-71 | 6755276-6755354 | 0.998529 | Paralog | 3/5 | 2/7 |
34 | cb3-52 | mir-789 | cbr-miR-789b | 23/23 | chrV | - | 49-71 | 3127594-3127671 | 0.926786 | Paralog | 2/5 | 3/11 |
35 | cb3-51 | mir-48 | cbr-miR-48 | 23/23 | chrV | + | 13-35 | 12275590-12275672 | 0.988533 | Paralog | 2/3 | 2/5 |
36 | cb3-50 | mir-241 | cbr-miR-241 | 21/21 | chrV | + | 9-29 | 12272736-12272813 | 0.98785 | Paralog | 2/9 | 2/11 |
37 | cb3-5 | mir-1 | mmu-miR-1-2-as | 21/21 | chrI | + | 7-27 | 7435827-7435901 | 0.998014 | Paralog | 41/61 | 3/166 |
38 | cb3-47 | mir-255 | cbr-miR-255 | 22/22 | chrV | + | 51-72 | 8908228-8908313 | 0.991434 | Paralog | 2/3 | 2/4 |
39 | cb3-45 | mir-87 | cel-miR-87 | 22/22 | chrV | + | 19-40 | 6389738-6389825 | 0.949709 | Paralog | 21/27 | 2/39 |
40 | cb3-45 | mir-87 | tca-miR-87 | 21/21 | chrV | + | 19-39 | 6389738-6389825 | 0.972955 | Paralog | 21/27 | 2/39 |
41 | cb3-45 | mir-87 | aga-miR-87 | 19/21 | chrV | + | 17-37 | 6389739-6389824 | 0.983255 | Paralog | 21/27 | 2/39 |
42 | cb3-45 | mir-87 | sme-miR-87a | 18/20 | chrV | + | 20-38 | 6389738-6389825 | 0.98964 | Paralog | 21/27 | 2/39 |
43 | cb3-45 | mir-87 | cbr-miR-87 | 20/20 | chrV | + | 18-37 | 6389739-6389824 | 0.989245 | Paralog | 21/27 | 2/39 |
44 | cb3-45 | mir-87 | bmo-miR-87 | 19/21 | chrV | + | 20-39 | 6389738-6389825 | 0.983287 | Paralog | 21/27 | 2/39 |
45 | cb3-43 | mir-72 | cbr-miR-72 | 19/19 | chrUn | - | 51-69 | 6734671-6734756 | 0.934663 | Paralog | 2/3 | 2/4 |
46 | cb3-4 | mir-244 | cbr-miR-244 | 24/24 | chrI | + | 16-39 | 2688433-2688519 | 0.999949 | Paralog | 2/5 | 2/6 |
47 | cb3-38 | mir-228 | cbr-miR-228 | 23/23 | chrIV | - | 12-34 | 8555782-8555864 | 0.994259 | Paralog | 2/4 | 2/6 |
48 | cb3-37 | mir-232 | cbr-miR-232 | 23/23 | chrIV | + | 50-72 | 5768767-5768846 | 0.957528 | Paralog | 2/3 | 3/6 |
49 | cb3-36 | mir-51 | cbr-miR-51 | 23/23 | chrIV | + | 17-39 | 5734732-5734819 | 0.993893 | Paralog | 2/4 | 2/5 |
50 | cb3-34 | mir-232 | cbr-miR-232 | 23/23 | chrIV | + | 50-72 | 5589897-5589976 | 0.957528 | Paralog | 2/3 | 3/6 |
51 | cb3-31 | mir-80 | cbr-miR-80 | 23/23 | chrIII | - | 50-72 | 13406593-13406668 | 0.869864 | Paralog | 2/2 | 2/3 |
52 | cb3-30 | mir-356 | cel-miR-356 | 19/21 | chrIII | - | 23-41 | 10353560-10353651 | 0.835012 | Paralog | 2/2 | 2/3 |
53 | cb3-30 | mir-356 | cbr-miR-356 | 21/21 | chrIII | - | 22-42 | 10353560-10353651 | 0.818546 | Paralog | 2/2 | 2/3 |
54 | cb3-29 | mir-86 | cbr-miR-86 | 23/23 | chrIII | - | 9-31 | 4132912-4132991 | 0.989614 | Paralog | 2/4 | 2/5 |
55 | cb3-28 | mir-34 | aga-miR-34 | 18/20 | chrIII | - | 39-57 | 3442860-3442967 | 0.950146 | Paralog | 45/67 | 3/144 |
56 | cb3-26 | mir-231 | cbr-miR-231 | 24/24 | chrIII | + | 50-73 | 9825074-9825156 | 0.939569 | Paralog | 2/2 | 2/3 |
57 | cb3-23 | mir-77 | cbr-miR-77 | 22/22 | chrII | - | 49-70 | 12523548-12523617 | 0.817489 | Paralog | 2/5 | 3/8 |
58 | cb3-22 | mir-77 | cbr-miR-77 | 22/22 | chrII | - | 49-70 | 12520831-12520900 | 0.817489 | Paralog | 2/5 | 3/8 |
59 | cb3-21 | mir-44 | cbr-miR-45 | 21/21 | chrII | - | 50-70 | 8058569-8058640 | 0.994191 | Paralog | 2/5 | 3/11 |
60 | cb3-20 | mir-42 | cel-miR-42 | 22/22 | chrII | - | 49-70 | 8049580-8049654 | 0.999441 | Paralog | 2/2 | 2/3 |
61 | cb3-20 | mir-42 | cbr-miR-42 | 20/20 | chrII | - | 50-69 | 8049580-8049654 | 0.998475 | Paralog | 2/2 | 2/3 |
62 | cb3-2 | mir-50 | cel-miR-50 | 21/22 | chrI | + | 6-27 | 2124822-2124896 | 0.99788 | Paralog | 2/4 | 2/5 |
63 | cb3-2 | mir-50 | cbr-miR-50 | 24/24 | chrI | + | 7-30 | 2124821-2124897 | 0.999221 | Paralog | 2/4 | 2/5 |
64 | cb3-18 | mir-252 | cbr-miR-252 | 23/23 | chrII | - | 10-32 | 7467799-7467878 | 0.809726 | Paralog | 10/22 | 2/31 |
65 | cb3-18 | mir-252 | cel-miR-252 | 23/23 | chrII | - | 8-30 | 7467800-7467879 | 0.932335 | Paralog | 10/22 | 2/31 |
66 | cb3-17 | mir-85 | cbr-miR-85 | 24/24 | chrII | - | 48-71 | 3615931-3616006 | 0.998135 | Paralog | 2/3 | 2/4 |
67 | cb3-16 | mir-60 | cbr-miR-60 | 23/23 | chrII | + | 49-71 | 8572393-8572471 | 0.977397 | Paralog | 2/4 | 2/5 |
68 | cb3-15 | mir-44 | cbr-miR-45 | 21/21 | chrII | + | 51-71 | 8061362-8061435 | 0.962454 | Paralog | 2/5 | 3/11 |
69 | cb3-14 | mir-35 | cbr-miR-35 | 22/22 | chrII | + | 49-70 | 7536630-7536706 | 0.996727 | Paralog | 2/3 | 3/5 |
70 | cb3-13 | mir-35 | cbr-miR-35 | 21/22 | chrII | + | 51-72 | 7536389-7536471 | 0.999965 | Paralog | 2/3 | 3/5 |
71 | cb3-13 | mir-36 | cbr-miR-36 | 20/22 | chrII | + | 51-71 | 7536389-7536471 | 0.999979 | Paralog | 3/4 | 3/6 |
72 | cb3-11 | mir-36 | cel-miR-36 | 20/22 | chrII | + | 52-71 | 7535774-7535858 | 0.99993 | Paralog | 3/4 | 3/6 |
73 | cb3-11 | mir-36 | cbr-miR-36 | 22/22 | chrII | + | 51-72 | 7535775-7535857 | 0.999965 | Paralog | 3/4 | 3/6 |
74 | cb3-10 | mir-234 | cbr-miR-234 | 21/21 | chrII | + | 47-67 | 319396-319466 | 0.969299 | Paralog | 2/3 | 2/4 |
75 | cb3-1 | mir-79 | spu-miR-79 | 20/22 | chrI | + | 49-68 | 1376282-1376356 | 0.942749 | Paralog | 22/28 | 2/45 |
76 | cb3-1 | mir-79 | ame-miR-79 | 19/21 | chrI | + | 50-69 | 1376282-1376356 | 0.935777 | Paralog | 22/28 | 2/45 |
77 | cb3-1 | mir-79 | cbr-miR-79 | 22/22 | chrI | + | 49-70 | 1376282-1376356 | 0.958445 | Paralog | 22/28 | 2/45 |
78 | cb3-1 | mir-79 | cap-miR-79 | 21/22 | chrI | + | 50-70 | 1376282-1376356 | 0.962442 | Paralog | 22/28 | 2/45 |
Total | 78 record(s). |